compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

Dependency Tree

• org.cateproject:cate-service:jar
  • xmlunit:xmlunit:jar
  • aspectj:aspectjweaver:jar
  • com.thoughtworks.xstream:xstream:jar
    • xpp3:xpp3_min:jar
  • org.springframework.ws:spring-oxm-tiger:jar
    • org.springframework.ws:spring-xml:jar
    • org.springframework.ws:spring-oxm:jar
    • stax:stax-api:jar
  • javax.servlet.jsp:jsp-api:jar
  • org.easymock:easymock:jar
  • org.unitils:unitils:jar
    • commons-dbcp:commons-dbcp:jar
      • commons-pool:commons-pool:jar
    • ognl:ognl:jar
  • org.springframework:spring-test:jar
  • mysql:mysql-connector-java:jar
  • com.ibm.lsid:lsid-server:jar
  • aspectj:aspectjrt:jar
  • org.cateproject:cate-persistence:jar
    • javax.xml.ws:jaxws-api:jar
      • javax.xml.bind:jaxb-api:jar
        • javax.xml.stream:stax-api:jar
      • javax.xml.soap:saaj-api:jar
      • javax.annotation:jsr250-api:jar
      • javax.jws:jsr181-api:jar
    • commons-discovery:commons-discovery:jar
    • javax.mail:mail:jar
    • org.apache.axis:axis:jar
    • org.cateproject:cate-model:jar
      • aspectj:aspectjlib:jar
      • com.sun.xml.bind:jaxb-impl:jar
      • org.jbpm:jbpm:jar
      • org.hibernate:hibernate-annotations:jar
        • org.hibernate:hibernate-commons-annotations:jar
        • org.hibernate:ejb3-persistence:jar
      • org.springframework.security:spring-security-core:jar
        • commons-codec:commons-codec:jar
      • org.hibernate:hibernate:jar
        • javax.transaction:jta:jar
        • asm:asm-attrs:jar
        • cglib:cglib:jar
        • asm:asm:jar
      • com.ibm.lsid:lsid-client:jar
      • org.hibernate:hibernate-search:jar
      • net.sf.ehcache:ehcache:jar
      • com.sun.xml.bind:jaxb1-impl:jar
      • joda-time:joda-time:jar
      • javax.xml.bind:jsr173_api:jar
      • xml-resolver:xml-resolver:jar
      • joda-time:joda-time-hibernate:jar
      • wsdl4j:wsdl4j:jar
      • org.dbunit:dbunit:jar
        • junit-addons:junit-addons:jar
          • junit:junit:jar
          • xerces:xercesImpl:jar
          • xerces:xmlParserAPIs:jar
        • poi:poi:jar
    • javax.xml:jaxrpc-api:jar
    • org.apache.axis:axis-jaxrpc:jar
    • javax.activation:activation:jar
    • org.apache.lucene:lucene-spellchecker:jar
      • org.apache.lucene:lucene-core:jar
    • net.sf.beanlib:beanlib-hibernate:jar
      • net.sf.beanlib:beanlib:jar
        • commons-logging:commons-logging-api:jar
        • commons-lang:commons-lang:jar
        • xstream:xstream:jar
        • aopalliance:aopalliance:jar
      • org.springframework:spring:jar
  • org.springmodules:spring-modules-jbpm31:jar
    • antlr:antlr:jar
    • commons-collections:commons-collections:jar
    • commons-logging:commons-logging:jar
    • log4j:log4j:jar
    • dom4j:dom4j:jar
      • xml-apis:xml-apis:jar
    • hsqldb:hsqldb:jar
    • bsh:bsh:jar
    • cglib:cglib-nodep:jar
    • jboss:jbpm:jar

Dependency Listings

CATE Service Layer

Creating a Taxonomic e-Science (CATE)

../../www.cate-project.org/cate-service

Unnamed - xmlunit:xmlunit:jar:1.0

AspectJ weaver

http://www.aspectj.org

XStream Core

Unnamed - xpp3:xpp3_min:jar:1.1.3.4.O

MXP1 is a stable XmlPull parsing engine that is based on ideas from XPP and in particular XPP2 but completely revised and rewritten to take the best advantage of latest JIT JVMs such as Hotspot in JDK 1.4+.

http://www.extreme.indiana.edu/xgws/xsoap/xpp/mxp1/

Spring O/X Mapping - Java 5

Spring Web Services is a product of the Spring community focused on creating document-driven Web services. It aims to facilitate contract-first SOAP service development, allowing for the creation of flexible web services using one of the many ways to manipulate XML payloads.

http://static.springframework.org/spring-ws/site/spring-oxm-tiger

Spring XML

Various XML support classes for Spring Web Services

http://static.springframework.org/spring-ws/site/spring-xml

Spring O/X Mapping

Spring Object/XML Mapping abstraction

http://static.springframework.org/spring-ws/site/spring-oxm

StAX API

StAX API is the standard java XML processing API defined by JSR-173

http://stax.codehaus.org/

Unnamed - javax.servlet.jsp:jsp-api:jar:2.0

EasyMock

EasyMock provides Mock Objects for interfaces in JUnit tests by generating them on the fly using Java's proxy mechanism

http://www.easymock.org

Unitils

Unitils provides utilities to further simplify unit-testing with JUnit, DBUnit, EasyMock Hibernate and Spring. The goal is to make unit-testing easy and maintainable by offering utilities such as automatic DB-schema maintainance and equality assertion through reflection.

http://unitils.sourceforge.net/

Commons DBCP

Commons Database Connection Pooling

http://jakarta.apache.org/commons/${pom.artifactId.substring(8)}/

Commons Pool

Commons Object Pooling Library

http://jakarta.apache.org/commons/${pom.artifactId.substring(8)}/

OGNL

OGNL stands for Object-Graph Navigation Language; it is an expression language for getting and setting properties of Java objects.

http://www.ognl.org/

Spring Framework: Test

Spring Framework: Test

http://www.springframework.org

MySQL java connector

MySQL java connector

http://dev.mysql.com/usingmysql/java/

Unnamed - com.ibm.lsid:lsid-server:pom:1.1.2

AspectJ runtime

http://www.aspectj.org

CATE Persistence Layer

Creating a Taxonomic e-Science (CATE)

../../www.cate-project.org/cate-persistence

Unnamed - javax.xml.ws:jaxws-api:jar:2.1

Unnamed - javax.xml.bind:jaxb-api:jar:2.1

Unnamed - javax.xml.stream:stax-api:jar:1.0-2

SOAP with Attachments API Package

http://java.sun.com/webservices/saaj/index.jsp

Unnamed - javax.annotation:jsr250-api:jar:1.0

Unnamed - javax.jws:jsr181-api:jar:1.0-MR1

Discovery

Commons Discovery

http://jakarta.apache.org/commons/${pom.artifactId.substring(8)}/

JavaMail API

The JavaMail API provides a platform-independent and protocol-independent framework to build mail and messaging applications.

https://glassfish.dev.java.net/javaee5/mail/

Unnamed - org.apache.axis:axis:jar:1.4

POM was created from deploy:deploy-file

CATE Data Model

Creating a Taxonomic e-Science (CATE)

../../www.cate-project.org/cate-model

AspectJ lib

http://www.aspectj.org

Unnamed - com.sun.xml.bind:jaxb-impl:jar:2.1

Unnamed - org.jbpm:jbpm:pom:3.1.4

Hibernate Annotations

Annotations metadata for Hibernate

http://annotations.hibernate.org

Hibernate Commons Annotations

Hibernate Commons Annotations is a utility project used by annotations based Hibernate sub-projects.

Java Persistence API

Java Persistence API

http://www.hibernate.org

Spring Security - Core

Spring Security

http://static.springframework.org/spring-security/site/index.html/spring-security-core

Codec

The codec package contains simple encoder and decoders for various formats such as Base64 and Hexadecimal. In addition to these widely used encoders and decoders, the codec package also maintains a collection of phonetic encoding utilities.

http://jakarta.apache.org/commons/codec/

Hibernate

Relational Persistence for Java

http://www.hibernate.org

Java Transaction API

The javax.transaction package. It is appropriate for inclusion in a classpath, and may be added to a Java 2 installation.

http://java.sun.com/products/jta

asm-attrs

http://asm.objectweb.org/

cglib

http://cglib.sourceforge.net/

asm

http://asm.objectweb.org/

Unnamed - com.ibm.lsid:lsid-client:pom:1.1.2

Unnamed - org.hibernate:hibernate-search:jar:3.0.1.GA

Hibernate Search

ehcache

Ehcache is a widely used pure Java, distributed in-process cache

http://ehcache.sf.net

Unnamed - com.sun.xml.bind:jaxb1-impl:jar:2.1

Joda time

Date and time library to replace JDK date handling.

http://joda-time.sourceforge.net

Unnamed - javax.xml.bind:jsr173_api:jar:1.0

XML Commons Resolver Component

xml-commons provides an Apache-hosted set of DOM, SAX, and JAXP interfaces for use in other xml-based projects. Our hope is that we can standardize on both a common version and packaging scheme for these critical XML standards interfaces to make the lives of both our developers and users easier.

http://xml.apache.org/commons/components/resolver/

Unnamed - joda-time:joda-time-hibernate:pom:1.0-SNAPSHOT

WSDL4J

Java stub generator for WSDL

http://sf.net/projects/wsdl4j

DbUnit Framework

DbUnit is a JUnit extension (also usable from Ant) targeted for database-driven projects that, among other things, puts your database into a known state between test runs. This is an excellent way to avoid the myriad of problems that can occur when one test case corrupts the database and causes subsequent tests to fail or exacerbate the damage.

http://dbunit.sourceforge.net

Unnamed - junit-addons:junit-addons:jar:1.4

JUnit

JUnit is a regression testing framework written by Erich Gamma and Kent Beck. It is used by the developer who implements unit tests in Java.

http://junit.org

Xerces2 Java Parser

Xerces2 is the next generation of high performance, fully compliant XML parsers in the Apache Xerces family. This new version of Xerces introduces the Xerces Native Interface (XNI), a complete framework for building parser components and configurations that is extremely modular and easy to program.

http://xerces.apache.org/xerces2-j/

Unnamed - xerces:xmlParserAPIs:jar:2.6.2

Unnamed - poi:poi:jar:2.5.1-final-20040804

Java API for XML Based RPC

Part of the Java Web Services Developer Pack 1.6

http://java.sun.com/webservices/jaxrpc/index.jsp

Unnamed - org.apache.axis:axis-jaxrpc:jar:1.4

POM was created from deploy:deploy-file

JavaBeans Activation Framework (JAF)

JavaBeans Activation Framework (JAF) is a standard extension to the Java platform that lets you take advantage of standard services to: determine the type of an arbitrary piece of data; encapsulate access to it; discover the operations available on it; and instantiate the appropriate bean to perform the operation(s).

http://java.sun.com/products/javabeans/jaf/index.jsp

Lucene Spellchecker

Spell Checker

http://lucene.apache.org/java/lucene-contrib/lucene-spellchecker

Lucene Core

Apache Lucene Java Core

http://lucene.apache.org/java/lucene-core

Java Bean Library for Hibernate

Particularly handy when used with Hibernate. It allows developers to easily reuse the same pojo classes for both persistence instances and data transfer objects.

http://beanlib.sourceforge.net/

Java Bean Library

Java Bean Utilities Library

http://beanlib.sourceforge.net/

Unnamed - commons-logging:commons-logging-api:jar:1.0.4

Lang

Commons.Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are considered to be so standard as to justify existence in java.lang.

http://jakarta.apache.org/commons/lang/

Unnamed - xstream:xstream:jar:1.1.3

AOP alliance

AOP Alliance

http://aopalliance.sourceforge.net

Spring Framework

Spring Framework

http://www.springframework.org

spring-modules-jbpm31

https://springmodules.dev.java.net/

Unnamed - antlr:antlr:jar:2.7.5

Unnamed - commons-collections:commons-collections:jar:2.1.1

Logging

Commons Logging is a thin adapter allowing configurable bridging to other, well known logging systems.

http://jakarta.apache.org/commons/${pom.artifactId.substring(8)}/

Unnamed - log4j:log4j:jar:1.2.8

dom4j

dom4j: the flexible XML framework for Java

http://dom4j.org

XML Commons External Components XML APIs

xml-commons provides an Apache-hosted set of DOM, SAX, and JAXP interfaces for use in other xml-based projects. Our hope is that we can standardize on both a common version and packaging scheme for these critical XML standards interfaces to make the lives of both our developers and users easier. The External Components portion of xml-commons contains interfaces that are defined by external standards organizations. For DOM, that's the W3C; for SAX it's David Megginson and sax.sourceforge.net; for JAXP it's Sun.

http://xml.apache.org/commons/#external

HSQLDB

Lightweight 100% Java SQL Database Engine

http://hsqldb.org/

Unnamed - bsh:bsh:jar:2.0b1

cglib

http://cglib.sourceforge.net/

Unnamed - jboss:jbpm:pom:3.1.4